CAPRIN1

S Wikipedije, slobodne enciklopedije
CAPRIN1
Dostupne strukture
PDBPretraga ortologa: PDBe RCSB
Spisak PDB ID kodova

4WBE, 4WBP

Identifikatori
AliasiCAPRIN1
Vanjski ID-jeviOMIM: 601178 MGI: 1858234 HomoloGene: 4310 GeneCards: CAPRIN1
Lokacija gena (čovjek)
Hromosom 11 (čovjek)
Hrom.Hromosom 11 (čovjek)[1]
Hromosom 11 (čovjek)
Genomska lokacija za CAPRIN1
Genomska lokacija za CAPRIN1
Bend11p13Početak34,051,731 bp[1]
Kraj34,102,610 bp[1]
Lokacija gena (miš)
Hromosom 2 (miš)
Hrom.Hromosom 2 (miš)[2]
Hromosom 2 (miš)
Genomska lokacija za CAPRIN1
Genomska lokacija za CAPRIN1
Bend2|2 E2Početak103,593,286 bp[2]
Kraj103,627,994 bp[2]
Obrazac RNK ekspresije


Više referentnih podataka o ekspresiji
Ontologija gena
Molekularna funkcija GO:0001948, GO:0016582 protein binding
RNA binding
Ćelijska komponenta cytoplasmic stress granule
dendrit
P-tijelo
integral component of plasma membrane
projekcija ćelije
membrana
citoplazma
citosol
sinapsa
Biološki proces Ćelijska diferencijacija
negative regulation of translation
positive regulation of dendrite morphogenesis
positive regulation of dendritic spine morphogenesis
Izvori:Amigo / QuickGO
Ortolozi
VrsteČovjekMiš
Entrez
Ensembl
UniProt
RefSeq (mRNK)

NM_005898
NM_203364

NM_001111289
NM_001111290
NM_001111291
NM_001111292
NM_016739

RefSeq (bjelančevina)

NP_005889
NP_976240

NP_001104759
NP_001104760
NP_001104761
NP_001104762
NP_058019

Lokacija (UCSC)Chr 11: 34.05 – 34.1 MbChr 2: 103.59 – 103.63 Mb
PubMed pretraga[3][4]
Wikipodaci
Pogledaj/uredi – čovjekPogledaj/uredi – miš

Kaprin-1 je protein koji je kod ljudi kodiran genom CAPRIN1.[5][6][7][8][9][10] Sugerirano je da je kaprin-1 (RNG105) esencijalan za formiranje dugoročnog pamćenja.[11]

Aminokiselinska sekvenca[uredi | uredi izvor]

Dužina polipeptidnog lanca je 709 aminokiselina, a molekulska težina 78.366 Da.[12].

1020304050
MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQ
TEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQ
EVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVL
ELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMS
LRLNEQYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQSNYFDSTH
NHQNGLCEEEEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFM
AETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQA
DPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQN
MDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYTASQPLYQ
PSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSKP
LHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFS
SQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRS
NQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSG
YTQSQFSAPRDYSGYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGM
PQMNTQQVN

Reference[uredi | uredi izvor]

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000135387 - Ensembl, maj 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000027184 - Ensembl, maj 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Ellis JA, Luzio JP (Oct 1995). "Identification and characterization of a novel protein (p137) which transcytoses bidirectionally in Caco-2 cells". J Biol Chem. 270 (35): 20717–23. doi:10.1074/jbc.270.35.20717. PMID 7657653.
  6. ^ Wang B, David MD, Schrader JW (Sep 2005). "Absence of caprin-1 results in defects in cellular proliferation". J Immunol. 175 (7): 4274–82. doi:10.4049/jimmunol.175.7.4274. PMID 16177067.
  7. ^ Solomon S, Xu Y, Wang B, David MD, Schubert P, Kennedy D, Schrader JW (Feb 2007). "Distinct Structural Features ofCaprin-1 Mediate Its Interaction with G3BP-1 and Its Induction of Phosphorylation of Eukaryotic Translation Initiation Factor 2α, Entry to Cytoplasmic Stress Granules, and Selective Interaction with a Subset of mRNAs". Mol Cell Biol. 27 (6): 2324–42. doi:10.1128/MCB.02300-06. PMC 1820512. PMID 17210633.
  8. ^ Grill B, Wilson GM, Zhang KX, Wang B, Doyonnas R, Quadroni M, Schrader JW (Feb 2004). "Activation/division of lymphocytes results in increased levels of cytoplasmic activation/proliferation-associated protein-1: prototype of a new family of proteins". J Immunol. 172 (4): 2389–400. doi:10.4049/jimmunol.172.4.2389. PMID 14764709.
  9. ^ Katsafanas GC, Moss B (Dec 2004). "Vaccinia virus intermediate stage transcription is complemented by Ras-GTPase-activating protein SH3 domain-binding protein (G3BP) and cytoplasmic activation/proliferation-associated protein (p137) individually or as a heterodimer". J Biol Chem. 279 (50): 52210–7. doi:10.1074/jbc.M411033200. PMID 15471883.
  10. ^ "Entrez Gene: GPIAP1 GPI-anchored membrane protein 1".
  11. ^ https://elifesciences.org/articles/29677
  12. ^ "UniProt, Q14444". Pristupljeno 19. 8. 2021.

Dopunska literatura[uredi | uredi izvor]