CIC (gen)

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CIC (gen)
Dostupne strukture
PDBPretraga ortologa: PDBe RCSB
Spisak PDB ID kodova

2M41, 4J2J, 4J2L

Identifikatori
AliasiCIC
Vanjski ID-jeviOMIM: 612082 MGI: 1918972 HomoloGene: 87637 GeneCards: CIC
Lokacija gena (čovjek)
Hromosom 19 (čovjek)
Hrom.Hromosom 19 (čovjek)[1]
Hromosom 19 (čovjek)
Genomska lokacija za CIC (gen)
Genomska lokacija za CIC (gen)
Bend19q13.2Početak42,268,537 bp[1]
Kraj42,295,797 bp[1]
Lokacija gena (miš)
Hromosom 7 (miš)
Hrom.Hromosom 7 (miš)[2]
Hromosom 7 (miš)
Genomska lokacija za CIC (gen)
Genomska lokacija za CIC (gen)
Bend7|7 A3Početak24,967,129 bp[2]
Kraj24,993,584 bp[2]
Obrazac RNK ekspresije
Više referentnih podataka o ekspresiji
Ontologija gena
Molekularna funkcija vezivanje sa DNK
GO:0001948, GO:0016582 vezivanje za proteine
chromatin binding
GO:0001200, GO:0001133, GO:0001201 DNA-binding transcription factor activity, RNA polymerase II-specific
Ćelijska komponenta jedro
nukleoplazma
intracellular membrane-bounded organelle
GO:0009327 makromolekulani kompleks
Biološki proces transcription, DNA-templated
GO:0009373 regulation of transcription, DNA-templated
GO:1901227 negative regulation of transcription by RNA polymerase II
brain development
Učenje
Memorija
socijalno ponašanje
GO:0045996 negative regulation of transcription, DNA-templated
lung alveolus development
Izvori:Amigo / QuickGO
Ortolozi
VrsteČovjekMiš
Entrez
Ensembl
UniProt
RefSeq (mRNK)
NM_001304815
NM_015125
NM_001379480
NM_001379482
NM_001379484

NM_001379485
NM_001386298

NM_001110131
NM_001110132
NM_027882
NM_001302811

RefSeq (bjelančevina)
NP_001291744
NP_055940
NP_001366409
NP_001366411
NP_001366413

NP_001366414

NP_001289740
NP_082158

Lokacija (UCSC)Chr 19: 42.27 – 42.3 MbChr 7: 24.97 – 24.99 Mb
PubMed pretraga[3][4]
Wikipodaci
Pogledaj/uredi – čovjekPogledaj/uredi – miš

Protein kapikua homologa je protein koji je kod ljudi kodiran genom CIC.[5][6][7]
Aminopkiselinska sekvenca

Simboli
1020304050
MYSAHRPLMPASSAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPD
PSVQPSEAQQPASHPVASNQSKEPAESAAVAHERPPGGTGSADPERPPGA
TCPESPGPGPPHPLGVVESGKGPPPTTEEEASGPPGEPRLDSETESDHDD
AFLSIMSPEIQLPLPPGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHI
RRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYH
DLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSM
SETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSSSCGAERLHTVGGPGSA
RPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGP
FAAPGEGGALAATGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDD
DVIADDGFGTTDIDLKCKERVTDSESGDSSGEDPEGNKGFGRKVFSPVIR
SSFTHCRPPLDPEPPGPPDPPVAFGKGYGSAPSSSASSPASSSASAATSF
SLGSGTFKAQESGQGSTAGPLRPPPPGAGGPATPSKATRFLPMDPATFRR
KRPESVGGLEPPGPSVIAAPPSGGGNILQTLVLPPNKEEQEGGGARVPSA
PAPSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEAS
PNDTAGARTEMGTGSRVPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLL
GTVGKAPATVTNLLVGTPGYGAPAPPAVQFIAQGAPGGGTTAGSGAGAGS
GPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQVAPAPAPAPGTKA
AAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKA
QSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFS
VPVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPS
STRITYVQSAGGHALPLGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGP
AFVQPLLSAGQAPLLAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSP
APTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGPPAPATATPAPTS
PFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRP
GPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWTPTARSSPPLP
PPAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAPAPA
VAPGGSSESSSGRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRVL
SEVDFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDL
DSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDRTGTEAEDVL
GELEYDKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADI
FPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPVPPPTGTAAAPAPT
PSPAGGPDPTSPSSDSGTAQAAPPLPPPPESGPGQPGWEGAPQPSPPPPG
PSTAATGR

Reference[uredi | uredi izvor]

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000079432 - Ensembl, maj 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000005442 - Ensembl, maj 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Lee CJ, Chan WI, Cheung M, Cheng YC, Appleby VJ, Orme AT, Scotting PJ (Oct 2002). "CIC, a member of a novel subfamily of the HMG-box superfamily, is transiently expressed in developing granule neurons". Brain Res Mol Brain Res. 106 (1–2): 151–6. doi:10.1016/S0169-328X(02)00439-4. PMID 12393275.
  6. ^ Lee CJ, Chan WI, Scotting PJ (Jun 2005). "CIC, a gene involved in cerebellar development and ErbB signaling, is significantly expressed in medulloblastomas". J Neurooncol. 73 (2): 101–8. doi:10.1007/s11060-004-4598-2. PMID 15981098. S2CID 24938086.
  7. ^ "Entrez Gene: CIC capicua transcriptional repressor [ Homo sapiens (human) ]".

Vanjski linkovi[uredi | uredi izvor]

Dopunska literatura[uredi | uredi izvor]