CXCL13

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CXCL13
Dostupne strukture
PDBPretraga ortologa: PDBe RCSB
Spisak PDB ID kodova

4ZAI, 5CBA, 5CBE

Identifikatori
AliasiCXCL13
Vanjski ID-jeviOMIM: 605149 MGI: 1888499 HomoloGene: 48431 GeneCards: CXCL13
Lokacija gena (čovjek)
Hromosom 4 (čovjek)
Hrom.Hromosom 4 (čovjek)[1]
Hromosom 4 (čovjek)
Genomska lokacija za CXCL13
Genomska lokacija za CXCL13
Bend4q21.1Početak77,511,753 bp[1]
Kraj77,611,834 bp[1]
Lokacija gena (miš)
Hromosom 5 (miš)
Hrom.Hromosom 5 (miš)[2]
Hromosom 5 (miš)
Genomska lokacija za CXCL13
Genomska lokacija za CXCL13
Bend5|5 E3Početak96,104,810 bp[2]
Kraj96,108,927 bp[2]
Ontologija gena
Molekularna funkcija receptor ligand activity
CCR10 chemokine receptor binding
cytokine activity
heparin binding
CXCR3 chemokine receptor binding
chemokine activity
protein heterodimerization activity
fibroblast growth factor binding
CXCR5 chemokine receptor binding
Ćelijska komponenta extracellular region
Vanćelijsko
Biološki proces chemokine-mediated signaling pathway
positive regulation of cytosolic calcium ion concentration
cell-cell signaling
germinal center formation
regulation of angiogenesis
Hemotaksija
endothelial cell chemotaxis to fibroblast growth factor
regulation of humoral immune response
cell surface receptor signaling pathway
response to lipopolysaccharide
regulation of cell population proliferation
defense response to bacterium
negative regulation of endothelial cell chemotaxis to fibroblast growth factor
positive regulation of T cell chemotaxis
GO:0046730, GO:0046737, GO:0046738, GO:0046736 Imuni odgovor
inflammatory response
chronic inflammatory response
defense response
antimicrobial humoral immune response mediated by antimicrobial peptide
regulation of signaling receptor activity
G protein-coupled receptor signaling pathway
lymphocyte chemotaxis across high endothelial venule
positive regulation of integrin activation
positive regulation of cell-cell adhesion mediated by integrin
B cell chemotaxis
GO:0032861, GO:0032862, GO:0032856 activation of GTPase activity
neutrophil chemotaxis
leukocyte chemotaxis
cellular response to lipopolysaccharide
Izvori:Amigo / QuickGO
Ortolozi
VrsteČovjekMiš
Entrez
Ensembl
UniProt
RefSeq (mRNK)

NM_006419
NM_001371558

NM_018866

RefSeq (bjelančevina)

NP_006410
NP_001358487

NP_061354

Lokacija (UCSC)Chr 4: 77.51 – 77.61 MbChr 5: 96.1 – 96.11 Mb
PubMed pretraga[3][4]
Wikipodaci
Pogledaj/uredi – čovjekPogledaj/uredi – miš

Hemokinski ligand 13 (C-X-C motiv), znan i kao B-lmfocitni hemoatraktant (BLC) ili B-ćelijski atraktantski hemokin 1 (BCA-1), jest citokinski protein koji je kod ljudi kodiran genom CXCL13 sa hromosoma 4.[5][6]

Aminokiselinska sekvenca[uredi | uredi izvor]

Dužina polipeptidnog lanca je 109 aminokiselina, а molekulska težina 12.664 Da.[7]

1020304050
MKFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDR
IQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLP
VPVFKRKIP

Funkcija[uredi | uredi izvor]

CXCL13 je mali hemokin koji pripada porodici hemokina CXC. Kao što mu druga imena sugerrajuu, ovaj hemokin ima selektivne hemotaksije za B-ćelije u koje pripadaju i B-1 i B -2 podskupine i izaziva njegove učinke interakcijom s hemokinskim receptorom CXCR5.[5][8] CXCL13 i njegov receptor CXCR5 kontroliraju organizaciju B-ćelija unutar folikula limfoidnih tkiva[9] i izrazito je eksprimiran u ljudskoj jetri, slezeni, limfnim čvorovima i crijevima.[5] Na ljudskom hromosomu 4 gen za CXCL13 nalazi se u grupi gena drugih CXC hemokina.[6]

Smatra se da u T-limfocitima ekspresija CXCL13 odražava klicino središte T-ćelija, posebno podskupa T-ćelija koji se naziva folikulne B-pomoćne T-ćelije (ili TFH ćelije). Stoga se smatra da ekspresija CXCL13 u T-ćelijskim limfomima, kao što je angioimunoblastni T-ćelijski limfom, odražava porijeklo neoplazijskih T-ćelija iz klicinog centra.[10]

Reference[uredi | uredi izvor]

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000156234 - Ensembl, maj 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000023078 - Ensembl, maj 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b c Legler DF, Loetscher M, Roos RS, Clark-Lewis I, Baggiolini M, Moser B (februar 1998). "B cell-attracting chemokine 1, a human CXC chemokine expressed in lymphoid tissues, selectively attracts B lymphocytes via BLR1/CXCR5". J. Exp. Med. 187 (4): 655–60. doi:10.1084/jem.187.4.655. PMC 2212150. PMID 9463416.
  6. ^ a b Gunn MD, Ngo VN, Ansel KM, Ekland EH, Cyster JG, Williams LT (februar 1998). "A B-cell-homing chemokine made in lymphoid follicles activates Burkitt's lymphoma receptor-1". Nature. 391 (6669): 799–803. doi:10.1038/35876. PMID 9486651. S2CID 4373691.
  7. ^ "UniProt, O43927" (jezik: engleski). Pristupljeno 24. 10. 2021.
  8. ^ Ansel KM, Harris RB, Cyster JG (januar 2002). "CXCL13 is required for B1 cell homing, natural antibody production, and body cavity immunity". Immunity. 16 (1): 67–76. doi:10.1016/S1074-7613(01)00257-6. PMID 11825566.
  9. ^ Ansel KM, Ngo VN, Hyman PL, Luther SA, Förster R, Sedgwick JD, Browning JL, Lipp M, Cyster JG (juli 2000). "A chemokine-driven positive feedback loop organizes lymphoid follicles". Nature. 406 (6793): 309–14. doi:10.1038/35018581. PMID 10917533. S2CID 4369622.
  10. ^ de Leval L, Rickman DS, Thielen C, Reynies A, Huang YL, Delsol G, Lamant L, Leroy K, Brière J, Molina T, Berger F, Gisselbrecht C, Xerri L, Gaulard P (juni 2007). "The gene expression profile of nodal peripheral T-cell lymphoma demonstrates a molecular link between angioimmunoblastic T-cell lymphoma (AITL) and follicular helper T (TFH) cells". Blood. 109 (11): 4952–63. doi:10.1182/blood-2006-10-055145. PMID 17284527.

Vanjski linkovi[uredi | uredi izvor]