LYSMD3

LYSMD3
Identifikatori
Aliasi	LYSMD3
Vanjski ID-jevi	MGI: 1915906 HomoloGene: 12722 GeneCards: LYSMD3
Lokacija gena (čovjek)
Hrom.	Hromosom 5 (čovjek)
Kraj	90,529,584 bp
Lokacija gena (miš)
Hrom.	Hromosom 13 (miš)
Kraj	81,820,990 bp
Obrazac RNK ekspresije
	Više referentnih podataka o ekspresiji
Ortolozi
	116068
	80289
	ENSG00000176018
	ENSMUSG00000035840
	Q7Z3D4
	Q99LE3
	NM_001286812; NM_198273
	NM_030257
	NP_001273741; NP_938014
	NP_084533
	Wikipodaci
Pogledaj/uredi – čovjek	Pogledaj/uredi – miš

Protein 3LysM i navodni peptidoglikan sa domenom jest protein koji je kod ljudi kodiran genom LYSMD3 sa hromosoma 5.^[5] Ovaj protein sadrži domen LysM.

Aminokiselinska sekvenca[uredi | uredi izvor]

Dužina polipeptidnog lanca je 306 aminokiselina, а molekulska težina 34.538 Da.^[6]

C: Cistein

D: Asparaginska kiselina

E: Glutaminska kiselina

F: Fenilalanin

G: Glicin

H: Histidin

I: Izoleucin

K: Lizin

L: Leucin

M: Metionin

N: Asparagin

P: Prolin

Q: Glutamin

R: Arginin

S: Serin

T: Treonin

V: Valin

W: Triptofan

Y: Tirozin

10	20	30	40	50
MAGRHQNRSF	PLPGVQSSGQ	VHAFGNCSDS	DILEEDAEVY	ELRSRGKEKV
RRSTSRDRLD	DIIVLTKDIQ	EGDTLNAIAL	QYCCTVADIK	RVNNLISDQD
FFALRSIKIP	VKKFSSLTET	LCPPKGRQTS	RHSSVQYSSE	QQEILPANDS
LAYSDSAGSF	LKEVDRDIEQ	IVKCTDNKRE	NLNEVVSALT	AQQMRFEPDN
KNTQRKDPYY	GADWGIGWWT	AVVIMLIVGI	ITPVFYLLYY	EILAKVDVSH
HSTVDSSHLH	SKITPPSQQR	EMENGIVPTK	GIHFSQQDDH	KLYSQDSQSP
AAQQET

Reference[uredi | uredi izvor]

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000176018 - Ensembl, maj 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000035840 - Ensembl, maj 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Entrez Gene: LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3".
^ "UniProt, Q7Z3D4" (jezik: engleski). Pristupljeno 16. 10. 2021.

Dopunska literatura[uredi | uredi izvor]

Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to Biology: A Functional Genomics Pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
Hartley JL, Temple GF, Brasch MA (2001). "DNA Cloning Using In Vitro Site-Specific Recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000176018 - Ensembl, maj 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000035840 - Ensembl, maj 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[entrez-5] "Entrez Gene: LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3".

[UniProt-6] "UniProt, Q7Z3D4" (jezik: engleski). Pristupljeno 16. 10. 2021.

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