TSC1

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TSC1
Dostupne strukture
PDBPretraga ortologa: PDBe RCSB
Spisak PDB ID kodova

5EJC, 4Z6Y

Identifikatori
AliasiTSC1
Vanjski ID-jeviOMIM: 605284 MGI: 1929183 HomoloGene: 314 GeneCards: TSC1
Lokacija gena (čovjek)
Hromosom 9 (čovjek)
Hrom.Hromosom 9 (čovjek)[1]
Hromosom 9 (čovjek)
Genomska lokacija za TSC1
Genomska lokacija za TSC1
Bend9q34.13Početak132,891,348 bp[1]
Kraj132,946,874 bp[1]
Lokacija gena (miš)
Hromosom 2 (miš)
Hrom.Hromosom 2 (miš)[2]
Hromosom 2 (miš)
Genomska lokacija za TSC1
Genomska lokacija za TSC1
Bend2|2 A3Početak28,531,240 bp[2]
Kraj28,581,179 bp[2]
Obrazac RNK ekspresije
Više referentnih podataka o ekspresiji
Ontologija gena
Molekularna funkcija chaperone binding
GO:0001948, GO:0016582 vezivanje za proteine
protein N-terminus binding
Hsp70 protein binding
ATPase inhibitor activity
Hsp90 protein binding
GTPase activating protein binding
Ćelijska komponenta citoplazma
cell cortex
growth cone
intracellular membrane-bounded organelle
lamellipodium
membrana
Mikronit
TSC1-TSC2 complex
citoskelet
citosol
jedro
perinuklearno područje citoplazme
Lipidna kapljica
ćelijska membrana
projekcija ćelije
GO:0009327 makromolekulani kompleks
chaperone complex
GO:0097483, GO:0097481 postsynaptic density
Biološki proces rRNA export from nucleus
regulation of cell cycle
neural tube closure
cerebral cortex development
memory T cell differentiation
regulation of protein kinase activity
positive regulation of focal adhesion assembly
myelination
GO:1903105 negative regulation of insulin receptor signaling pathway
synapse organization
regulation of translation
hippocampus development
regulation of phosphoprotein phosphatase activity
cell-matrix adhesion
potassium ion transport
adaptive immune response
protein heterooligomerization
Nefrogeneza
nervous system development
cell projection organization
GO:0032861, GO:0032862, GO:0032856 activation of GTPase activity
regulation of focal adhesion assembly
glucose import
regulation of cell-matrix adhesion
negative regulation of cell size
response to insulin
cardiac muscle cell differentiation
negative regulation of translation
negative regulation of cell population proliferation
cellular response to oxygen-glucose deprivation
adult locomotory behavior
negative regulation of TOR signaling
regulation of neuron death
negative regulation of macroautophagy
negative regulation of neuron projection development
positive regulation of macroautophagy
GO:0034259 negative regulation of GTPase activity
regulation of stress fiber assembly
positive regulation of stress fiber assembly
negative regulation of oxidative stress-induced neuron death
negative regulation of ATP-dependent activity
protein stabilization
Izvori:Amigo / QuickGO
Ortolozi
VrsteČovjekMiš
Entrez
Ensembl
UniProt
RefSeq (mRNK)

NM_000368
NM_001008567
NM_001162426
NM_001162427
NM_001362177

NM_022887
NM_001289575
NM_001289576

RefSeq (bjelančevina)

NP_000359
NP_001155898
NP_001155899
NP_001349106

NP_001276504
NP_001276505
NP_075025

Lokacija (UCSC)Chr 9: 132.89 – 132.95 MbChr 2: 28.53 – 28.58 Mb
PubMed pretraga[3][4]
Wikipodaci
Pogledaj/uredi – čovjekPogledaj/uredi – miš

Protein 1 gomoljaste skleroze (TSC1), poznat i kao hamartin, je protein koji je kod ljudi kodiran genom TSC1.[5]

Aminokiselinska sekvenca[uredi | uredi izvor]

Dužina polipeptidnog lanca je 1.164 aminokiseline, а molekulska težina 129.767 Da.[6]

1020304050
MAQQANVGELLAMLDSPMLGVRDDVTAVFKENLNSDRGPMLVNTLVDYYL
ETSSQPALHILTTLQEPHDKHLLDRINEYVGKAATRLSILSLLGHVIRLQ
PSWKHKLSQAPLLPSLLKCLKMDTDVVVLTTGVLVLITMLPMIPQSGKQH
LLDFFDIFGRLSSWCLKKPGHVAEVYLVHLHASVYALFHRLYGMYPCNFV
SFLRSHYSMKENLETFEEVVKPMMEHVRIHPELVTGSKDHELDPRRWKRL
ETHDVVIECAKISLDPTEASYEDGYSVSHQISARFPHRSADVTTSPYADT
QNSYGCATSTPYSTSRLMLLNMPGQLPQTLSSPSTRLITEPPQATLWSPS
MVCGMTTPPTSPGNVPPDLSHPYSKVFGTTAGGKGTPLGTPATSPPPAPL
CHSDDYVHISLPQATVTPPRKEERMDSARPCLHRQHHLLNDRGSEEPPGS
KGSVTLSDLPGFLGDLASEEDSIEKDKEEAAISRELSEITTAEAEPVVPR
GGFDSPFYRDSLPGSQRKTHSAASSSQGASVNPEPLHSSLDKLGPDTPKQ
AFTPIDLPCGSADESPAGDRECQTSLETSIFTPSPCKIPPPTRVGFGSGQ
PPPYDHLFEVALPKTAHHFVIRKTEELLKKAKGNTEEDGVPSTSPMEVLD
RLIQQGADAHSKELNKLPLPSKSVDWTHFGGSPPSDEIRTLRDQLLLLHN
QLLYERFKRQQHALRNRRLLRKVIKAAALEEHNAAMKDQLKLQEKDIQMW
KVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKL
EDCRNMIAELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNR
QLLVLGEVNELYLEQLQNKHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQ
RLDTSQKRILELESHLAKKDHLLLEQKKYLEDVKLQARGQLQAAESRYEA
QKRITQVFELEILDLYGRLEKDGLLKKLEEEKAEAAEAAEERLDCCNDGC
SDSMVGHNEEASGHNGETKTPRPSSARGSSGSRGGGGSSSSSSELSTPEK
PPHQRAGPFSSRWETTMGEASASIPTTVGSLPSSKSFLGMKARELFRNKS
ESQCDEDGMTSSLSESLKTELGKDLGVEAKIPLNLDGPHPSPPTPDSVGQ
LHIMDYNETHHEHS

Funkcija[uredi | uredi izvor]

TSC1 funkcionira kao košaperon koji inhibira aktivnost šaperonskih ATPaza šaperona Hsp90 (protein toplotnog šoka-90) i usporava njegov ciklus praćenja. Tsc1 funkcionira kao posrednik Hsp90 u praćenju klijenata kinaze i nekinaze, uključujući Tsc2, čime se sprječava njihova sveprisutna i degradacija u proteasomu.[7] TSC1, TSC2 i TBC1D7 je kompleks više proteina poznat i kao kompleks TSC. Ovaj kompleks negativno regulira signalizaciju mTORC1, funkcionirajući kao protein koji aktivira GTPazu (GAP) za malu GTPazu Rheb, bitan aktivator mTORC1. TSC kompleks je uključen u supresiju tumora.

Klinički značaj[uredi | uredi izvor]

Defekti ovog gena mogu uzrokovati tuberoznu sklerozu, zbog funkcionalnog oštećenja kompleksa TSC. Oni u TSC1 mogu biti i uzrok fokusne korteksne displazije . TSC1 može biti uključen u zaštitu moždanih neurona u CA3 regiji hipokampusa od posljedica moždanog udara.[8]

Interakcije[uredi | uredi izvor]

Pokazano je da TSC1 stupa u interakciju sa:

Također pogledajte[uredi | uredi izvor]

Reference[uredi | uredi izvor]

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000165699 - Ensembl, maj 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026812 - Ensembl, maj 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: TSC1 tuberous sclerosis 1".
  6. ^ "UniProt, Q92574". Pristupljeno 12. 9. 2021.
  7. ^ a b c Woodford MR, Sager RA, Marris E, Dunn DM, Blanden AR, Murphy RL, Rensing N, Shapiro O, Panaretou B, Prodromou C, Loh SN, Gutmann DH, Bourboulia D, Bratslavsky G, Wong M, Mollapour M (decembar 2017). "Tumor suppressor Tsc1 is a new Hsp90 co-chaperone that facilitates folding of kinase and non-kinase clients". The EMBO Journal. 36 (24): 3650–3665. doi:10.15252/embj.201796700. PMC 5730846. PMID 29127155.
  8. ^ Papadakis M, Hadley G, Xilouri M, Hoyte LC, Nagel S, McMenamin MM, Tsaknakis G, Watt SM, Drakesmith CW, Chen R, Wood MJ, Zhao Z, Kessler B, Vekrellis K, Buchan AM (mart 2013). "Tsc1 (hamartin) confers neuroprotection against ischemia by inducing autophagy". Nature Medicine. 19 (3): 351–7. doi:10.1038/nm.3097. PMC 3744134. PMID 23435171.
  9. ^ Roux PP, Ballif BA, Anjum R, Gygi SP, Blenis J (septembar 2004). "Tumor-promoting phorbol esters and activated Ras inactivate the tuberous sclerosis tumor suppressor complex via p90 ribosomal S6 kinase". Proceedings of the National Academy of Sciences of the United States of America. 101 (37): 13489–94. Bibcode:2004PNAS..10113489R. doi:10.1073/pnas.0405659101. PMC 518784. PMID 15342917.
  10. ^ a b Dan HC, Sun M, Yang L, Feldman RI, Sui XM, Ou CC, Nellist M, Yeung RS, Halley DJ, Nicosia SV, Pledger WJ, Cheng JQ (septembar 2002). "Phosphatidylinositol 3-kinase/Akt pathway regulates tuberous sclerosis tumor suppressor complex by phosphorylation of tuberin". The Journal of Biological Chemistry. 277 (38): 35364–70. doi:10.1074/jbc.M205838200. PMID 12167664.
  11. ^ Haddad LA, Smith N, Bowser M, Niida Y, Murthy V, Gonzalez-Agosti C, Ramesh V (novembar 2002). "The TSC1 tumor suppressor hamartin interacts with neurofilament-L and possibly functions as a novel integrator of the neuronal cytoskeleton". The Journal of Biological Chemistry. 277 (46): 44180–6. doi:10.1074/jbc.M207211200. PMID 12226091.
  12. ^ a b Astrinidis A, Senapedis W, Henske EP (januar 2006). "Hamartin, the tuberous sclerosis complex 1 gene product, interacts with polo-like kinase 1 in a phosphorylation-dependent manner". Human Molecular Genetics. 15 (2): 287–97. doi:10.1093/hmg/ddi444. PMID 16339216.
  13. ^ Hodges AK, Li S, Maynard J, Parry L, Braverman R, Cheadle JP, DeClue JE, Sampson JR (decembar 2001). "Pathological mutations in TSC1 and TSC2 disrupt the interaction between hamartin and tuberin". Human Molecular Genetics. 10 (25): 2899–905. doi:10.1093/hmg/10.25.2899. PMID 11741833.
  14. ^ Aicher LD, Campbell JS, Yeung RS (juni 2001). "Tuberin phosphorylation regulates its interaction with hamartin. Two proteins involved in tuberous sclerosis". The Journal of Biological Chemistry. 276 (24): 21017–21. doi:10.1074/jbc.C100136200. PMID 11290735.
  15. ^ van Slegtenhorst M, Nellist M, Nagelkerken B, Cheadle J, Snell R, van den Ouweland A, Reuser A, Sampson J, Halley D, van der Sluijs P (juni 1998). "Interaction between hamartin and tuberin, the TSC1 and TSC2 gene products". Human Molecular Genetics. 7 (6): 1053–7. doi:10.1093/hmg/7.6.1053. PMID 9580671.
  16. ^ Nellist M, Goedbloed MA, de Winter C, Verhaaf B, Jankie A, Reuser AJ, van den Ouweland AM, van der Sluijs P, Halley DJ (oktobar 2002). "Identification and characterization of the interaction between tuberin and 14-3-3zeta". The Journal of Biological Chemistry. 277 (42): 39417–24. doi:10.1074/jbc.M204802200. PMID 12176984.
  17. ^ Li Y, Inoki K, Guan KL (septembar 2004). "Biochemical and functional characterizations of small GTPase Rheb and TSC2 GAP activity". Molecular and Cellular Biology. 24 (18): 7965–75. doi:10.1128/MCB.24.18.7965-7975.2004. PMC 515062. PMID 15340059.
  18. ^ Mak BC, Takemaru K, Kenerson HL, Moon RT, Yeung RS (februar 2003). "The tuberin-hamartin complex negatively regulates beta-catenin signaling activity". The Journal of Biological Chemistry. 278 (8): 5947–51. doi:10.1074/jbc.C200473200. PMID 12511557.
  19. ^ Ma L, Chen Z, Erdjument-Bromage H, Tempst P, Pandolfi PP (april 2005). "Phosphorylation and functional inactivation of TSC2 by Erk implications for tuberous sclerosis and cancer pathogenesis". Cell. 121 (2): 179–93. doi:10.1016/j.cell.2005.02.031. PMID 15851026. S2CID 18663447.
  20. ^ Cai SL, Tee AR, Short JD, Bergeron JM, Kim J, Shen J, Guo R, Johnson CL, Kiguchi K, Walker CL (april 2006). "Activity of TSC2 is inhibited by AKT-mediated phosphorylation and membrane partitioning". The Journal of Cell Biology. 173 (2): 279–89. doi:10.1083/jcb.200507119. PMC 2063818. PMID 16636147.
  21. ^ Cao Y, Kamioka Y, Yokoi N, Kobayashi T, Hino O, Onodera M, Mochizuki N, Nakae J (decembar 2006). "Interaction of FoxO1 and TSC2 induces insulin resistance through activation of the mammalian target of rapamycin/p70 S6K pathway". The Journal of Biological Chemistry. 281 (52): 40242–51. doi:10.1074/jbc.M608116200. PMID 17077083.
  22. ^ Inoki K, Zhu T, Guan KL (novembar 2003). "TSC2 mediates cellular energy response to control cell growth and survival". Cell. 115 (5): 577–90. doi:10.1016/S0092-8674(03)00929-2. PMID 14651849. S2CID 18173817.
  23. ^ Nellist M, Burgers PC, van den Ouweland AM, Halley DJ, Luider TM (august 2005). "Phosphorylation and binding partner analysis of the TSC1-TSC2 complex". Biochemical and Biophysical Research Communications. 333 (3): 818–26. doi:10.1016/j.bbrc.2005.05.175. PMID 15963462.
  24. ^ Goncharova EA, Goncharov DA, Spaits M, Noonan DJ, Talovskaya E, Eszterhas A, Krymskaya VP (maj 2006). "Abnormal growth of smooth muscle-like cells in lymphangioleiomyomatosis: Role for tumor suppressor TSC2". American Journal of Respiratory Cell and Molecular Biology. 34 (5): 561–72. doi:10.1165/rcmb.2005-0300OC. PMC 2644221. PMID 16424383.
  25. ^ Astrinidis A, Senapedis W, Coleman TR, Henske EP (decembar 2003). "Cell cycle-regulated phosphorylation of hamartin, the product of the tuberous sclerosis complex 1 gene, by cyclin-dependent kinase 1/cyclin B". The Journal of Biological Chemistry. 278 (51): 51372–9. doi:10.1074/jbc.M303956200. PMID 14551205.
  26. ^ Nellist M, Verhaaf B, Goedbloed MA, Reuser AJ, van den Ouweland AM, Halley DJ (decembar 2001). "TSC2 missense mutations inhibit tuberin phosphorylation and prevent formation of the tuberin-hamartin complex". Human Molecular Genetics. 10 (25): 2889–98. doi:10.1093/hmg/10.25.2889. PMID 11741832.
  27. ^ Benvenuto G, Li S, Brown SJ, Braverman R, Vass WC, Cheadle JP, Halley DJ, Sampson JR, Wienecke R, DeClue JE (decembar 2000). "The tuberous sclerosis-1 (TSC1) gene product hamartin suppresses cell growth and augments the expression of the TSC2 product tuberin by inhibiting its ubiquitination". Oncogene. 19 (54): 6306–16. doi:10.1038/sj.onc.1204009. PMID 11175345.
  28. ^ Murthy V, Haddad LA, Smith N, Pinney D, Tyszkowski R, Brown D, Ramesh V (maj 2000). "Similarities and differences in the subcellular localization of hamartin and tuberin in the kidney". American Journal of Physiology. Renal Physiology. 278 (5): F737–46. doi:10.1152/ajprenal.2000.278.5.F737. PMID 10807585.
  29. ^ Miloloza A, Rosner M, Nellist M, Halley D, Bernaschek G, Hengstschläger M (juli 2000). "The TSC1 gene product, hamartin, negatively regulates cell proliferation". Human Molecular Genetics. 9 (12): 1721–7. doi:10.1093/hmg/9.12.1721. PMID 10915759.

Dopunska literatura[uredi | uredi izvor]

Vanjski linkovi[uredi | uredi izvor]

Šablon:Regulatori GTP-vezujućih proteina